Attention OSOS 2019 Registrants
Welcome to OSOS 2019. Please read the instructions below carefully.
The Participant Guide provides guidance on how to prepare your computer for the workshop. Make sure you download and install the software(s) listed under the ‘Download and test before start of OSOS” section. After that and/or during the workshop, please download the session specific code and data files placed next to each of the presenters or sessions.
If you have any questions please contact Nick Jacobsen or Giri Athrey.
About OSOS 2019
Dates: August 30 – September 1, 2019
Location: ILSB Auditorium (AggieMap link)
Open Source for Open Science (OSOS) 2019 is a free workshop aimed to familiarize participants with selected open source software and programing tools to be able to conduct quantitative analysis and statistical methods for scientific inquiry. This year we are excited to have six module instructors focusing on an introduction to R, graphics in R, intermediate R tools for data handling, multivariate analysis in R, ecological niche modeling, accessing data repositories, a phylogenetic pipeline tutorial and a WGCNA tutorial. This course is aimed at incoming EEB graduate students; however, you need not be in EEB or a graduate student to attend. In addition, you may receive 1 credit hour of EEBL 612 for this course in the Fall 2019 semester.
Print OSOS Workshop 2019 Flyer and Schedule
Friday, August 30, 2019
Session 1, 5:00-6:30pm : Danielle Walkup, Intro to R [Download Walkup files]
Session 2, 6:45-8:00pm : Danielle Walkup, Intro to R contd.
Saturday, August 31, 2019
Session 3, 9:00-10:30am : Carl Hjelmen, Statistical analyses with R [Download Hjelman files]
Session 4, 10:45-12:15pm : Pierre Lesne, Graphics using R base [Download Lesne files (Mac and Windows)]
Session 5, 1:30-3:00pm : Adrian Castellanos, Intro to graphics with ggplot2 [Download Castellanos files]
Session 6, 3:00-4:30pm : Adrian Castellanos, Intro to tidyverse
Sunday, September 1, 2019
Session 7, 9:00-10:30am : Zach Hancock, Phylogenetics in R and BEAST [Download Hancock files]
Session 8, 10:45-12:15pm : Mark Hoang, Intro to Linux [Download Hoang files]
Session 9, 1:30-3:00pm : Michael Dickens, Intro to HPRC at TAMU [Download Dickens files]